Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 AC080080.1-201ENST00000625121 2420 ntBASIC19.36■□□□□ 0.69
RHBDL3P58872 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.36■□□□□ 0.69
RHBDL3P58872 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RHBDL3P58872 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 COX5BP8-201ENST00000416911 349 ntBASIC19.36■□□□□ 0.69
RHBDL3P58872 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.36■□□□□ 0.69
RHBDL3P58872 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.36■□□□□ 0.69
RHBDL3P58872 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RHBDL3P58872 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RHBDL3P58872 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.36■□□□□ 0.69
RHBDL3P58872 TP53TG3HP-202ENST00000569755 579 ntBASIC19.36■□□□□ 0.69
RHBDL3P58872 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.36■□□□□ 0.69
RHBDL3P58872 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RHBDL3P58872 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RHBDL3P58872 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.35■□□□□ 0.69
RHBDL3P58872 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 AC007541.1-201ENST00000570282 1469 ntBASIC19.35■□□□□ 0.69
RHBDL3P58872 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.35■□□□□ 0.69
RHBDL3P58872 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.35■□□□□ 0.69
RHBDL3P58872 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 NME2P1-201ENST00000426182 414 ntBASIC19.35■□□□□ 0.69
RHBDL3P58872 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.35■□□□□ 0.69
RHBDL3P58872 SERBP1P3-201ENST00000459980 809 ntBASIC19.35■□□□□ 0.69
RHBDL3P58872 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.35■□□□□ 0.69
RHBDL3P58872 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.35■□□□□ 0.69
RHBDL3P58872 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.35■□□□□ 0.69
RHBDL3P58872 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.35■□□□□ 0.69
RHBDL3P58872 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RHBDL3P58872 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.35■□□□□ 0.69
RHBDL3P58872 AC022211.2-201ENST00000585075 2527 ntBASIC19.34■□□□□ 0.69
RHBDL3P58872 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.34■□□□□ 0.69
RHBDL3P58872 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.34■□□□□ 0.69
RHBDL3P58872 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.34■□□□□ 0.69
RHBDL3P58872 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.34■□□□□ 0.69
RHBDL3P58872 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.34■□□□□ 0.69
RHBDL3P58872 HIST3H2BA-201ENST00000436555 524 ntBASIC19.34■□□□□ 0.69
RHBDL3P58872 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.34■□□□□ 0.69
RHBDL3P58872 RN7SL692P-201ENST00000464677 288 ntBASIC19.34■□□□□ 0.69
RHBDL3P58872 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.34■□□□□ 0.69
RHBDL3P58872 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RHBDL3P58872 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.34■□□□□ 0.69
RHBDL3P58872 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.34■□□□□ 0.69
RHBDL3P58872 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RHBDL3P58872 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.34■□□□□ 0.69
RHBDL3P58872 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RHBDL3P58872 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RHBDL3P58872 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.33■□□□□ 0.69
RHBDL3P58872 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.33■□□□□ 0.69
RHBDL3P58872 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms