Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.25■□□□□ 0.51
HTTP42858 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
HTTP42858 INTS4P2-202ENST00000614726 2019 ntBASIC18.25■□□□□ 0.51
HTTP42858 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.25■□□□□ 0.51
HTTP42858 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.25■□□□□ 0.51
HTTP42858 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.25■□□□□ 0.51
HTTP42858 RN7SL769P-201ENST00000469386 295 ntBASIC18.25■□□□□ 0.51
HTTP42858 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.25■□□□□ 0.51
HTTP42858 HNRNPUP1-201ENST00000554987 333 ntBASIC18.25■□□□□ 0.51
HTTP42858 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTTP42858 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HTTP42858 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.24■□□□□ 0.51
HTTP42858 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HTTP42858 AC026979.3-201ENST00000607315 403 ntBASIC18.24■□□□□ 0.51
HTTP42858 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.24■□□□□ 0.51
HTTP42858 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 AC018735.1-201ENST00000437208 1502 ntBASIC18.24■□□□□ 0.51
HTTP42858 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 AC106760.1-201ENST00000508690 800 ntBASIC18.24■□□□□ 0.51
HTTP42858 PTP4A1P2-201ENST00000546033 454 ntBASIC18.24■□□□□ 0.51
HTTP42858 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HTTP42858 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.24■□□□□ 0.51
HTTP42858 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 AL031731.1-201ENST00000642131 2094 ntBASIC18.24■□□□□ 0.51
HTTP42858 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HTTP42858 AC006277.1-201ENST00000624348 1610 ntBASIC18.23■□□□□ 0.51
HTTP42858 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HTTP42858 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HTTP42858 MIR326-201ENST00000362220 95 ntBASIC18.23■□□□□ 0.51
HTTP42858 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.23■□□□□ 0.51
HTTP42858 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HTTP42858 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.23■□□□□ 0.51
HTTP42858 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.23■□□□□ 0.51
HTTP42858 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.23■□□□□ 0.51
HTTP42858 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.23■□□□□ 0.51
HTTP42858 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.23■□□□□ 0.51
HTTP42858 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
HTTP42858 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HTTP42858 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.23■□□□□ 0.51
HTTP42858 AC005252.2-201ENST00000624630 1141 ntBASIC18.23■□□□□ 0.51
HTTP42858 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HTTP42858 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HTTP42858 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.22■□□□□ 0.51
HTTP42858 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.22■□□□□ 0.51
HTTP42858 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 HIST2H2BC-201ENST00000498492 580 ntBASIC18.22■□□□□ 0.51
HTTP42858 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HTTP42858 U62317.3-201ENST00000608319 855 ntBASIC18.22■□□□□ 0.51
HTTP42858 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.22■□□□□ 0.51
HTTP42858 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
HTTP42858 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
HTTP42858 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
HTTP42858 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 AL359711.2-201ENST00000563105 872 ntBASIC18.22■□□□□ 0.51
HTTP42858 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.22■□□□□ 0.51
HTTP42858 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HTTP42858 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HTTP42858 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HTTP42858 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.21■□□□□ 0.51
HTTP42858 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HTTP42858 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HTTP42858 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HTTP42858 Z93015.1-201ENST00000451718 390 ntBASIC18.21■□□□□ 0.51
HTTP42858 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.21■□□□□ 0.51
HTTP42858 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HTTP42858 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.21■□□□□ 0.51
HTTP42858 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms