Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SPDYE11-202ENST00000450699 704 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AC079140.1-201ENST00000508039 487 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 PRYP6-201ENST00000514804 343 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SPDYE9P-201ENST00000570642 692 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SPDYE10P-202ENST00000612005 668 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SPDYE8P-202ENST00000612377 668 ntBASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 KRT18P13-201ENST00000400056 1290 ntBASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC023511.2-201ENST00000618803 211 ntBASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC105339.1-204ENST00000636249 355 ntBASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 PCDH8P1-201ENST00000428983 2773 ntBASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC1Q9NTX5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 SPCS2P4-201ENST00000436160 681 ntBASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 TIMM8BP1-201ENST00000452384 211 ntBASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 LINC01225-203ENST00000563550 1244 ntBASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 AC073389.1-201ENST00000595595 795 ntBASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms