Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm44719-201ENSMUST00000206404 149 ntBASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ska1Q9CPV1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gm11594-201ENSMUST00000122313 162 ntBASIC12.82□□□□□ -0.36
Ska1Q9CPV1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ska1Q9CPV1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Pck2-205ENSMUST00000226352 2784 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms