Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.56□□□□□ -0.08
TMEM54Q969K7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM54Q969K7 AL592424.1-201ENST00000563624 1536 ntBASIC14.56□□□□□ -0.08
TMEM54Q969K7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.56□□□□□ -0.08
TMEM54Q969K7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM54Q969K7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM54Q969K7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 FAM58CP-201ENST00000435741 640 ntBASIC14.55□□□□□ -0.08
TMEM54Q969K7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 AC092902.6-201ENST00000641783 218 ntBASIC14.55□□□□□ -0.08
TMEM54Q969K7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM54Q969K7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM54Q969K7 U82695.1-201ENST00000635752 1889 ntBASIC14.55□□□□□ -0.08
TMEM54Q969K7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AL671277.1-201ENST00000429656 993 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 MTDHP5-201ENST00000598980 586 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 AC073439.1-201ENST00000624121 1774 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 DOC2GP-204ENST00000639052 2548 ntBASIC14.54□□□□□ -0.08
TMEM54Q969K7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM54Q969K7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TMEM54Q969K7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM54Q969K7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM54Q969K7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms