Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Birc2-201ENSMUST00000054878 378 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf4Q8K4J2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf4Q8K4J2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gm13036-201ENSMUST00000117799 748 ntBASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf4Q8K4J2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf4Q8K4J2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms