Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
CTPS1P17812 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CTPS1P17812 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS1P17812 ACTG1P14-201ENST00000446382 1122 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 SPDYE11-202ENST00000450699 704 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CTPS1P17812 SPDYE9P-201ENST00000570642 692 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.65■□□□□ 0.26
CTPS1P17812 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 AC026120.1-201ENST00000611536 926 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 SPDYE10P-202ENST00000612005 668 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 SPDYE8P-202ENST00000612377 668 ntBASIC16.65■□□□□ 0.26
CTPS1P17812 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS1P17812 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS1P17812 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS1P17812 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS1P17812 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTPS1P17812 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTPS1P17812 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTPS1P17812 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CTPS1P17812 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTPS1P17812 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTPS1P17812 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CTPS1P17812 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.64■□□□□ 0.25
CTPS1P17812 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTPS1P17812 AC004967.1-201ENST00000453589 447 ntBASIC16.64■□□□□ 0.25
CTPS1P17812 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.64■□□□□ 0.25
CTPS1P17812 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.64■□□□□ 0.25
CTPS1P17812 AL596442.2-201ENST00000610240 980 ntBASIC16.64■□□□□ 0.25
CTPS1P17812 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.64■□□□□ 0.25
CTPS1P17812 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS1P17812 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 GGT3P-204ENST00000453783 1664 ntBASIC16.64■□□□□ 0.25
CTPS1P17812 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS1P17812 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CTPS1P17812 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.64■□□□□ 0.25
CTPS1P17812 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CTPS1P17812 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS1P17812 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CTPS1P17812 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTPS1P17812 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS1P17812 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 KRT18P34-201ENST00000488218 1270 ntBASIC16.63■□□□□ 0.25
CTPS1P17812 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.63■□□□□ 0.25
CTPS1P17812 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.63■□□□□ 0.25
CTPS1P17812 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS1P17812 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS1P17812 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS1P17812 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms