Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.28□□□□□ -0.92
Smim1P0C8K7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smim1P0C8K7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smim1P0C8K7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.27□□□□□ -0.93
Smim1P0C8K7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.27□□□□□ -0.93
Smim1P0C8K7 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.27□□□□□ -0.93
Smim1P0C8K7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim1P0C8K7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms