Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 WASH6P-202ENST00000359512 1437 ntBASIC16.78■□□□□ 0.28
HLA-DQB2P05538 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DQB2P05538 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 YBX2P1-201ENST00000394192 760 ntBASIC16.77■□□□□ 0.28
HLA-DQB2P05538 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DQB2P05538 CYP2T1P-202ENST00000641596 2535 ntBASIC16.77■□□□□ 0.28
HLA-DQB2P05538 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.77■□□□□ 0.27
HLA-DQB2P05538 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.76■□□□□ 0.27
HLA-DQB2P05538 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQB2P05538 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms