Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trdmt1O55055 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trdmt1O55055 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.88□□□□□ -0.03
Trdmt1O55055 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm18056-201ENSMUST00000207670 568 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm18061-201ENSMUST00000208350 562 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm18063-201ENSMUST00000208529 568 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm18052-201ENSMUST00000208750 559 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Gm8227-201ENSMUST00000223306 571 ntBASIC14.87□□□□□ -0.03
Trdmt1O55055 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trdmt1O55055 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trdmt1O55055 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trdmt1O55055 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.86□□□□□ -0.03
Trdmt1O55055 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trdmt1O55055 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.86□□□□□ -0.03
Trdmt1O55055 Gm11637-201ENSMUST00000120601 592 ntBASIC14.86□□□□□ -0.03
Trdmt1O55055 Gm16479-201ENSMUST00000121706 932 ntBASIC14.86□□□□□ -0.03
Trdmt1O55055 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trdmt1O55055 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.86□□□□□ -0.03
Trdmt1O55055 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdmt1O55055 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trdmt1O55055 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Gm37259-201ENSMUST00000193903 849 ntBASIC14.85□□□□□ -0.03
Trdmt1O55055 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.85□□□□□ -0.03
Trdmt1O55055 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.85□□□□□ -0.03
Trdmt1O55055 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.85□□□□□ -0.03
Trdmt1O55055 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.85□□□□□ -0.03
Trdmt1O55055 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Trdmt1O55055 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trdmt1O55055 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trdmt1O55055 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdmt1O55055 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms