Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm5035-201ENSMUST00000215581 927 ntBASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm25857-201ENSMUST00000082788 129 ntBASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ndc1Q8VCB1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ndc1Q8VCB1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ndc1Q8VCB1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ndc1Q8VCB1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ndc1Q8VCB1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm15376-201ENSMUST00000122258 783 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm5356-201ENSMUST00000093326 615 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ndc1Q8VCB1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm15824-201ENSMUST00000119516 955 ntBASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm8584-201ENSMUST00000171982 758 ntBASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ndc1Q8VCB1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ndc1Q8VCB1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 168.1 ms