Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.63□□□□□ -0.55
Casp6O08738 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Casp6O08738 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.63□□□□□ -0.55
Casp6O08738 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.63□□□□□ -0.55
Casp6O08738 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Gm27514-201ENSMUST00000183692 110 ntBASIC11.63□□□□□ -0.55
Casp6O08738 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.63□□□□□ -0.55
Casp6O08738 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Casp6O08738 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.63□□□□□ -0.55
Casp6O08738 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casp6O08738 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Casp6O08738 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Gm16177-201ENSMUST00000120728 718 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Gm1335-201ENSMUST00000121653 386 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Gm10156-201ENSMUST00000122364 462 ntBASIC11.62□□□□□ -0.55
Casp6O08738 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Casp6O08738 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.62□□□□□ -0.55
Casp6O08738 Gm19184-201ENSMUST00000196798 928 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.62□□□□□ -0.55
Casp6O08738 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Gm26315-201ENSMUST00000083890 321 ntBASIC11.62□□□□□ -0.55
Casp6O08738 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.62□□□□□ -0.55
Casp6O08738 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Casp6O08738 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casp6O08738 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casp6O08738 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms