Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 AC013467.2-201ENST00000605472 835 ntBASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDP1Q9Y5B0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 AL158211.3-201ENST00000607385 239 ntBASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CTDP1Q9Y5B0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.66
CTDP1Q9Y5B0 PKD1P5-201ENST00000532415 10291 ntBASIC19.14■□□□□ 0.66
CTDP1Q9Y5B0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CTDP1Q9Y5B0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CTDP1Q9Y5B0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.14■□□□□ 0.66
CTDP1Q9Y5B0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 RARRES2P9-201ENST00000565168 469 ntBASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 AC018529.1-201ENST00000613063 361 ntBASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms