Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Stag2O35638 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Stag2O35638 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.58■□□□□ 0.08
Stag2O35638 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Stag2O35638 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Stag2O35638 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.58■□□□□ 0.08
Stag2O35638 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.57■□□□□ 0.08
Stag2O35638 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Stag2O35638 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.57■□□□□ 0.08
Stag2O35638 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Stag2O35638 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Stag2O35638 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Stag2O35638 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Stag2O35638 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.57■□□□□ 0.08
Stag2O35638 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Gm27892-201ENSMUST00000185017 106 ntBASIC15.57■□□□□ 0.08
Stag2O35638 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.57■□□□□ 0.08
Stag2O35638 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.57■□□□□ 0.08
Stag2O35638 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
Stag2O35638 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Stag2O35638 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.57■□□□□ 0.08
Stag2O35638 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.57■□□□□ 0.08
Stag2O35638 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Stag2O35638 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.56■□□□□ 0.08
Stag2O35638 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.56■□□□□ 0.08
Stag2O35638 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm15371-201ENSMUST00000117057 784 ntBASIC15.56■□□□□ 0.08
Stag2O35638 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Stag2O35638 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.56■□□□□ 0.08
Stag2O35638 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Stag2O35638 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Stag2O35638 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.56■□□□□ 0.08
Stag2O35638 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Stag2O35638 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Stag2O35638 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.56■□□□□ 0.08
Stag2O35638 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Stag2O35638 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Stag2O35638 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Stag2O35638 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.55■□□□□ 0.08
Stag2O35638 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Gm8602-201ENSMUST00000184045 607 ntBASIC15.55■□□□□ 0.08
Stag2O35638 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.55■□□□□ 0.08
Stag2O35638 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Gm7287-201ENSMUST00000205267 602 ntBASIC15.55■□□□□ 0.08
Stag2O35638 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag2O35638 Gm5356-201ENSMUST00000093326 615 ntBASIC15.55■□□□□ 0.08
Stag2O35638 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Stag2O35638 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms