Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPARGC1AQ9UBK2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AC087641.1-201ENST00000557561 1021 ntBASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AC040169.1-201ENST00000565382 521 ntBASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AC018845.2-201ENST00000568326 409 ntBASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 PMS2P7-201ENST00000506558 1336 ntBASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PPARGC1AQ9UBK2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 MIR940-201ENST00000401276 94 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 KRT19P2-202ENST00000557173 1012 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AL031432.2-201ENST00000566714 459 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AL928711.1-201ENST00000570165 459 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AP001350.2-201ENST00000625104 1094 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AC012569.1-201ENST00000591191 1524 ntBASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
PPARGC1AQ9UBK2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PPARGC1AQ9UBK2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms