Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PMS2P4-201ENST00000412466 1052 ntBASIC15.91■□□□□ 0.14
BRF2Q9HAW0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 TPM4P1-201ENST00000436100 807 ntBASIC15.91■□□□□ 0.14
BRF2Q9HAW0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 AC009947.1-201ENST00000444350 727 ntBASIC15.91■□□□□ 0.14
BRF2Q9HAW0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 IGHV3-22-201ENST00000520721 359 ntBASIC15.91■□□□□ 0.14
BRF2Q9HAW0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 RNU1-129P-201ENST00000384064 167 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 CRYGEP-201ENST00000412192 528 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 AL513480.1-201ENST00000451731 511 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 U1.21-201ENST00000580816 167 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 SLC25A6P4-201ENST00000586535 553 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 PCDH8P1-201ENST00000428983 2773 ntBASIC15.9■□□□□ 0.14
BRF2Q9HAW0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BRF2Q9HAW0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 AC006449.6-201ENST00000612330 2296 ntBASIC15.89■□□□□ 0.13
BRF2Q9HAW0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 HMGA1P7-201ENST00000406908 502 ntBASIC15.89■□□□□ 0.13
BRF2Q9HAW0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 RNA5SP415-201ENST00000517246 115 ntBASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.89■□□□□ 0.13
BRF2Q9HAW0 AL031055.1-201ENST00000606362 631 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms