Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK3Q9BYB0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 MEP1AP4-201ENST00000423244 1087 ntBASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 MIR6787-201ENST00000616675 61 ntBASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AL162726.2-201ENST00000438986 1017 ntBASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AC133552.6-201ENST00000613406 534 ntBASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK3Q9BYB0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AL442647.2-201ENST00000429864 857 ntBASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AL355994.2-201ENST00000447882 704 ntBASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SHANK3Q9BYB0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AC099336.1-201ENST00000417053 1171 ntBASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK3Q9BYB0 KRT8P44-201ENST00000441609 1350 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms