Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.58■□□□□ 0.72
BRF1Q92994 AC120114.3-201ENST00000611923 658 ntBASIC19.58■□□□□ 0.72
BRF1Q92994 BX640515.1-201ENST00000617215 977 ntBASIC19.58■□□□□ 0.72
BRF1Q92994 AL645728.2-201ENST00000641974 660 ntBASIC19.58■□□□□ 0.72
BRF1Q92994 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.58■□□□□ 0.72
BRF1Q92994 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF1Q92994 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.58■□□□□ 0.72
BRF1Q92994 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.58■□□□□ 0.72
BRF1Q92994 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BRF1Q92994 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF1Q92994 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRF1Q92994 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF1Q92994 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
BRF1Q92994 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.58■□□□□ 0.72
BRF1Q92994 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.58■□□□□ 0.72
BRF1Q92994 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRF1Q92994 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 CYP2T1P-202ENST00000641596 2535 ntBASIC19.57■□□□□ 0.72
BRF1Q92994 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 PCGF3-213ENST00000620529 1899 ntBASIC19.57■□□□□ 0.72
BRF1Q92994 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
BRF1Q92994 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.57■□□□□ 0.72
BRF1Q92994 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.57■□□□□ 0.72
BRF1Q92994 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.57■□□□□ 0.72
BRF1Q92994 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.57■□□□□ 0.72
BRF1Q92994 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.57■□□□□ 0.72
BRF1Q92994 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BRF1Q92994 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRF1Q92994 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.56■□□□□ 0.72
BRF1Q92994 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
BRF1Q92994 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.56■□□□□ 0.72
BRF1Q92994 AC026691.1-201ENST00000602502 2017 ntBASIC19.56■□□□□ 0.72
BRF1Q92994 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF1Q92994 AL031055.1-201ENST00000606362 631 ntBASIC19.56■□□□□ 0.72
BRF1Q92994 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BRF1Q92994 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF1Q92994 AL391005.1-201ENST00000623953 2435 ntBASIC19.56■□□□□ 0.72
BRF1Q92994 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BRF1Q92994 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 LINC02199-201ENST00000506655 2702 ntBASIC19.56■□□□□ 0.72
BRF1Q92994 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.56■□□□□ 0.72
BRF1Q92994 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRF1Q92994 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BRF1Q92994 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BRF1Q92994 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.55■□□□□ 0.72
BRF1Q92994 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRF1Q92994 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.55■□□□□ 0.72
BRF1Q92994 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRF1Q92994 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms