Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.24□□□□□ -0.13
NcanP55066 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.24□□□□□ -0.13
NcanP55066 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.24□□□□□ -0.13
NcanP55066 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.24□□□□□ -0.13
NcanP55066 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.24□□□□□ -0.13
NcanP55066 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.24□□□□□ -0.13
NcanP55066 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.24□□□□□ -0.13
NcanP55066 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
NcanP55066 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.24□□□□□ -0.13
NcanP55066 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NcanP55066 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.24□□□□□ -0.13
NcanP55066 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NcanP55066 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Gm12502-201ENSMUST00000120197 444 ntBASIC14.23□□□□□ -0.13
NcanP55066 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Gm9540-201ENSMUST00000188230 478 ntBASIC14.23□□□□□ -0.13
NcanP55066 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.23□□□□□ -0.13
NcanP55066 Gm5950-201ENSMUST00000213337 772 ntBASIC14.23□□□□□ -0.13
NcanP55066 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NcanP55066 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.23□□□□□ -0.13
NcanP55066 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NcanP55066 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NcanP55066 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.22□□□□□ -0.13
NcanP55066 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.22□□□□□ -0.13
NcanP55066 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NcanP55066 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.22□□□□□ -0.13
NcanP55066 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.22□□□□□ -0.13
NcanP55066 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.22□□□□□ -0.13
NcanP55066 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.22□□□□□ -0.13
NcanP55066 Gm32025-201ENSMUST00000217960 307 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms