Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm18905-201ENSMUST00000205454 928 ntBASIC12.8□□□□□ -0.36
Nid1P10493 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nid1P10493 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nid1P10493 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.79□□□□□ -0.36
Nid1P10493 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Nid1P10493 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.79□□□□□ -0.36
Nid1P10493 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.79□□□□□ -0.36
Nid1P10493 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.79□□□□□ -0.36
Nid1P10493 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nid1P10493 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nid1P10493 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.78□□□□□ -0.36
Nid1P10493 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.78□□□□□ -0.36
Nid1P10493 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Gm15770-201ENSMUST00000117498 584 ntBASIC12.78□□□□□ -0.36
Nid1P10493 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.78□□□□□ -0.36
Nid1P10493 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Gm27772-201ENSMUST00000184900 187 ntBASIC12.78□□□□□ -0.36
Nid1P10493 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nid1P10493 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.78□□□□□ -0.36
Nid1P10493 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.78□□□□□ -0.36
Nid1P10493 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.78□□□□□ -0.36
Nid1P10493 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Nid1P10493 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.78□□□□□ -0.36
Nid1P10493 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
Nid1P10493 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Nid1P10493 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nid1P10493 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms