Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL391256.1-201ENST00000443260 1855 ntBASIC15.22■□□□□ 0.03
HMG20AQ9NP66 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.22■□□□□ 0.03
HMG20AQ9NP66 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 KRT89P-201ENST00000620027 1478 ntBASIC15.21■□□□□ 0.03
HMG20AQ9NP66 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 AC113347.1-201ENST00000413321 391 ntBASIC15.21■□□□□ 0.03
HMG20AQ9NP66 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 AC097493.4-201ENST00000641197 219 ntBASIC15.21■□□□□ 0.03
HMG20AQ9NP66 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMG20AQ9NP66 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMG20AQ9NP66 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AC010491.1-201ENST00000563101 2797 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL596087.1-201ENST00000400979 1969 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL137013.1-201ENST00000432946 1228 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 BX664615.1-201ENST00000443558 458 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL441883.1-201ENST00000566170 1045 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL136038.4-201ENST00000603606 1261 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 BX276092.7-203ENST00000637198 1536 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL391807.1-203ENST00000604392 2365 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 GRK6P1-201ENST00000400595 1711 ntBASIC15.2■□□□□ 0.02
HMG20AQ9NP66 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMG20AQ9NP66 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.19■□□□□ 0.02
HMG20AQ9NP66 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMG20AQ9NP66 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.19■□□□□ 0.02
HMG20AQ9NP66 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMG20AQ9NP66 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMG20AQ9NP66 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms