Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AQP7P5-201ENST00000428759 1049 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AQP7P4-201ENST00000447083 1042 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AQP7P2-201ENST00000453967 1041 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC055811.3-201ENST00000584952 686 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AQP7P3-201ENST00000624547 1041 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC011471.3-201ENST00000623576 402 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 SERPINA13P-202ENST00000478994 924 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AL161773.1-201ENST00000624845 863 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ESPNP-201ENST00000270691 2015 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 SLC25A15P1-201ENST00000456738 342 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 SLC25A15P3-201ENST00000505530 290 ntBASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE2Q8WXH0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 VDAC1P7-201ENST00000462417 847 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AL590640.2-201ENST00000457038 527 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC004923.1-202ENST00000642106 209 ntBASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 BAX-205ENST00000391871 687 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE2Q8WXH0 AC244197.1-201ENST00000456494 951 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms