Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 AC007967.2-201ENST00000432613 625 ntBASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 PDPK2P-202ENST00000562415 1191 ntBASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 AC106730.1-201ENST00000566722 1090 ntBASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H3Q8IXZ2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 AC016027.1-202ENST00000607927 1699 ntBASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H3Q8IXZ2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 AC007950.2-201ENST00000615045 2347 ntBASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 AP002472.1-201ENST00000577490 586 ntBASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 AL513190.1-201ENST00000621254 727 ntBASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZC3H3Q8IXZ2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms