Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Mir7684-201ENSMUST00000183858 60 ntBASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Samm50Q8BGH2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Samm50Q8BGH2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Mir6977-201ENSMUST00000184960 64 ntBASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Gm7775-201ENSMUST00000218871 853 ntBASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Samm50Q8BGH2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Samm50Q8BGH2 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms