Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccne1Q61457 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccne1Q61457 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ccne1Q61457 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccne1Q61457 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccne1Q61457 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Gm25261-201ENSMUST00000157416 134 ntBASIC17.68■□□□□ 0.42
Ccne1Q61457 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccne1Q61457 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.68■□□□□ 0.42
Ccne1Q61457 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccne1Q61457 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccne1Q61457 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm25927-201ENSMUST00000175058 117 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm43133-201ENSMUST00000197472 463 ntBASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ccne1Q61457 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccne1Q61457 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.66■□□□□ 0.42
Ccne1Q61457 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccne1Q61457 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccne1Q61457 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms