Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm44346-201ENSMUST00000198851 141 ntBASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa3Q3UPR0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gm42660-201ENSMUST00000197733 947 ntBASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa3Q3UPR0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Gm11543-201ENSMUST00000120758 370 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms