Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATN1P54259 AC023310.3-201ENST00000557027 670 ntBASIC18.27■□□□□ 0.52
ATN1P54259 AC100756.1-201ENST00000562736 682 ntBASIC18.27■□□□□ 0.52
ATN1P54259 AP005482.1-201ENST00000563722 1273 ntBASIC18.27■□□□□ 0.52
ATN1P54259 AC138749.3-201ENST00000567691 622 ntBASIC18.27■□□□□ 0.52
ATN1P54259 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.27■□□□□ 0.52
ATN1P54259 AC116165.1-201ENST00000611806 668 ntBASIC18.27■□□□□ 0.52
ATN1P54259 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.27■□□□□ 0.52
ATN1P54259 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATN1P54259 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATN1P54259 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATN1P54259 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
ATN1P54259 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.27■□□□□ 0.51
ATN1P54259 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.27■□□□□ 0.51
ATN1P54259 LETM1P2-201ENST00000597330 2178 ntBASIC18.27■□□□□ 0.51
ATN1P54259 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATN1P54259 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 AC004408.2-201ENST00000623613 2777 ntBASIC18.26■□□□□ 0.51
ATN1P54259 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.26■□□□□ 0.51
ATN1P54259 AL138781.2-201ENST00000617896 1843 ntBASIC18.26■□□□□ 0.51
ATN1P54259 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.26■□□□□ 0.51
ATN1P54259 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
ATN1P54259 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
ATN1P54259 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.26■□□□□ 0.51
ATN1P54259 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.26■□□□□ 0.51
ATN1P54259 BNIP3P42-201ENST00000454982 569 ntBASIC18.26■□□□□ 0.51
ATN1P54259 CROCCP4-201ENST00000457096 498 ntBASIC18.26■□□□□ 0.51
ATN1P54259 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.26■□□□□ 0.51
ATN1P54259 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.26■□□□□ 0.51
ATN1P54259 BNIP3P29-201ENST00000598302 571 ntBASIC18.26■□□□□ 0.51
ATN1P54259 AC011447.5-201ENST00000616168 564 ntBASIC18.26■□□□□ 0.51
ATN1P54259 GPR182-203ENST00000622922 591 ntBASIC18.26■□□□□ 0.51
ATN1P54259 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATN1P54259 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATN1P54259 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATN1P54259 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.26■□□□□ 0.51
ATN1P54259 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATN1P54259 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 SEPT7P7-201ENST00000420492 1301 ntBASIC18.25■□□□□ 0.51
ATN1P54259 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 AC133963.1-201ENST00000504166 1679 ntBASIC18.25■□□□□ 0.51
ATN1P54259 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ATN1P54259 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 AL133338.1-201ENST00000565695 1517 ntBASIC18.25■□□□□ 0.51
ATN1P54259 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.25■□□□□ 0.51
ATN1P54259 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.25■□□□□ 0.51
ATN1P54259 AC098850.1-201ENST00000419919 790 ntBASIC18.25■□□□□ 0.51
ATN1P54259 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.25■□□□□ 0.51
ATN1P54259 AL589987.1-201ENST00000453380 819 ntBASIC18.25■□□□□ 0.51
ATN1P54259 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.25■□□□□ 0.51
ATN1P54259 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.25■□□□□ 0.51
ATN1P54259 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.25■□□□□ 0.51
ATN1P54259 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
ATN1P54259 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.25■□□□□ 0.51
ATN1P54259 AC004461.2-201ENST00000629517 803 ntBASIC18.25■□□□□ 0.51
ATN1P54259 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.25■□□□□ 0.51
ATN1P54259 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATN1P54259 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms