Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ZNF140P52738 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF140P52738 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF140P52738 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF140P52738 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 POU5F1P6-201ENST00000466990 990 ntBASIC16.54■□□□□ 0.24
ZNF140P52738 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.54■□□□□ 0.24
ZNF140P52738 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 AL078644.1-201ENST00000609881 752 ntBASIC16.54■□□□□ 0.24
ZNF140P52738 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 MTHFR-217ENST00000641820 1569 ntBASIC16.54■□□□□ 0.24
ZNF140P52738 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF140P52738 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF140P52738 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 AC016027.1-202ENST00000607927 1699 ntBASIC16.53■□□□□ 0.24
ZNF140P52738 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
ZNF140P52738 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 AC040169.1-201ENST00000565382 521 ntBASIC16.53■□□□□ 0.24
ZNF140P52738 AC099522.2-201ENST00000607001 744 ntBASIC16.53■□□□□ 0.24
ZNF140P52738 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF140P52738 PCDH8P1-201ENST00000428983 2773 ntBASIC16.53■□□□□ 0.24
ZNF140P52738 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF140P52738 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
ZNF140P52738 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF140P52738 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF140P52738 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF140P52738 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF140P52738 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 AC002056.1-201ENST00000395613 760 ntBASIC16.52■□□□□ 0.24
ZNF140P52738 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF140P52738 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF140P52738 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ZNF140P52738 AC002347.1-201ENST00000569543 541 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms