Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 RPS2P28-201ENST00000314255 741 ntBASIC15.87■□□□□ 0.13
PTPN6P29350 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN6P29350 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN6P29350 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN6P29350 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 AL049840.3-201ENST00000602669 611 ntBASIC15.87■□□□□ 0.13
PTPN6P29350 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 AC107918.4-202ENST00000641623 219 ntBASIC15.87■□□□□ 0.13
PTPN6P29350 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 GGT4P-201ENST00000623672 1708 ntBASIC15.86■□□□□ 0.13
PTPN6P29350 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN6P29350 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN6P29350 AC093909.1-201ENST00000504731 1122 ntBASIC15.86■□□□□ 0.13
PTPN6P29350 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTPN6P29350 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.86■□□□□ 0.13
PTPN6P29350 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 AL139424.1-201ENST00000607572 797 ntBASIC15.86■□□□□ 0.13
PTPN6P29350 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN6P29350 REXO1L3P-201ENST00000622202 1288 ntBASIC15.86■□□□□ 0.13
PTPN6P29350 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PTPN6P29350 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN6P29350 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
PTPN6P29350 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN6P29350 AC132872.4-202ENST00000622924 2756 ntBASIC15.86■□□□□ 0.13
PTPN6P29350 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN6P29350 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 PKD1P5-201ENST00000532415 10291 ntBASIC15.85■□□□□ 0.13
PTPN6P29350 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.85■□□□□ 0.13
PTPN6P29350 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 LAGE3P1-201ENST00000425356 484 ntBASIC15.85■□□□□ 0.13
PTPN6P29350 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN6P29350 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN6P29350 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 AC024909.3-201ENST00000611513 2257 ntBASIC15.85■□□□□ 0.13
PTPN6P29350 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms