Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc8P09025 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm3890-201ENSMUST00000182416 207 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxc8P09025 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm7046-201ENSMUST00000221351 977 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.46□□□□□ -0.09
Hoxc8P09025 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc8P09025 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc8P09025 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc8P09025 Gm15236-201ENSMUST00000117309 379 ntBASIC14.45□□□□□ -0.1
Hoxc8P09025 Gm12241-201ENSMUST00000118330 726 ntBASIC14.45□□□□□ -0.1
Hoxc8P09025 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc8P09025 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc8P09025 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Hoxc8P09025 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc8P09025 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm13297-201ENSMUST00000120205 934 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm24548-201ENSMUST00000158650 108 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm44364-201ENSMUST00000198368 141 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm4768-201ENSMUST00000206199 686 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Gm19163-201ENSMUST00000223313 780 ntBASIC14.44□□□□□ -0.1
Hoxc8P09025 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc8P09025 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc8P09025 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc8P09025 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc8P09025 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hoxc8P09025 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc8P09025 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc8P09025 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc8P09025 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc8P09025 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.43□□□□□ -0.1
Hoxc8P09025 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc8P09025 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms