Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10□□□□□ -0.81
TcraP01849 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TcraP01849 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TcraP01849 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.99□□□□□ -0.81
TcraP01849 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.99□□□□□ -0.81
TcraP01849 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.99□□□□□ -0.81
TcraP01849 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.99□□□□□ -0.81
TcraP01849 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.99□□□□□ -0.81
TcraP01849 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.99□□□□□ -0.81
TcraP01849 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
TcraP01849 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.99□□□□□ -0.81
TcraP01849 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TcraP01849 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC9.99□□□□□ -0.81
TcraP01849 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
TcraP01849 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
TcraP01849 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.98□□□□□ -0.81
TcraP01849 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
TcraP01849 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
TcraP01849 Gm13884-201ENSMUST00000118103 829 ntBASIC9.98□□□□□ -0.81
TcraP01849 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.98□□□□□ -0.81
TcraP01849 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Gm45167-201ENSMUST00000208007 322 ntBASIC9.98□□□□□ -0.81
TcraP01849 Gm9182-201ENSMUST00000217829 639 ntBASIC9.98□□□□□ -0.81
TcraP01849 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
TcraP01849 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.98□□□□□ -0.81
TcraP01849 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
TcraP01849 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TcraP01849 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms