Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TP53TG3HP-202ENST00000569755 579 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AL132655.2-201ENST00000596276 594 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC008738.7-201ENST00000609744 511 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC073439.1-201ENST00000624121 1774 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC134043.2-201ENST00000624206 2238 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AL353779.1-201ENST00000434793 351 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC007274.1-201ENST00000439805 662 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 RNA5SP410-201ENST00000516285 106 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC009407.1-201ENST00000568958 598 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC140912.1-201ENST00000577171 1054 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AL844908.2-201ENST00000609461 460 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 MIR6752-201ENST00000618442 71 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AC067852.2-201ENST00000590513 2313 ntBASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC187A0A096LP49 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 AC007541.1-201ENST00000570282 1469 ntBASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 RPL37AP1-201ENST00000412502 279 ntBASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 AC105021.1-202ENST00000570572 669 ntBASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms