Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.63■■□□□ 1.05
Cstf1Q99LC2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cstf1Q99LC2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cstf1Q99LC2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cstf1Q99LC2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.63■■□□□ 1.05
Cstf1Q99LC2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.62■■□□□ 1.05
Cstf1Q99LC2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cstf1Q99LC2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cstf1Q99LC2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cstf1Q99LC2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cstf1Q99LC2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cstf1Q99LC2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cstf1Q99LC2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.59■■□□□ 1.05
Cstf1Q99LC2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cstf1Q99LC2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Cstf1Q99LC2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cstf1Q99LC2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cstf1Q99LC2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cstf1Q99LC2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.58■■□□□ 1.05
Cstf1Q99LC2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cstf1Q99LC2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cstf1Q99LC2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Cstf1Q99LC2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cstf1Q99LC2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.57■■□□□ 1.04
Cstf1Q99LC2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cstf1Q99LC2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cstf1Q99LC2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.55■■□□□ 1.04
Cstf1Q99LC2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cstf1Q99LC2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cstf1Q99LC2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cstf1Q99LC2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.55■■□□□ 1.04
Cstf1Q99LC2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cstf1Q99LC2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cstf1Q99LC2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cstf1Q99LC2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cstf1Q99LC2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cstf1Q99LC2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cstf1Q99LC2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cstf1Q99LC2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.52■■□□□ 1.04
Cstf1Q99LC2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cstf1Q99LC2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cstf1Q99LC2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cstf1Q99LC2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cstf1Q99LC2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.52■■□□□ 1.03
Cstf1Q99LC2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cstf1Q99LC2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cstf1Q99LC2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cstf1Q99LC2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cstf1Q99LC2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 398.2 ms