Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb4Q91XZ6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Gm11687-201ENSMUST00000118911 886 ntBASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb4Q91XZ6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb4Q91XZ6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Pcdhb4Q91XZ6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb4Q91XZ6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb4Q91XZ6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb4Q91XZ6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb4Q91XZ6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb4Q91XZ6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb4Q91XZ6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhb4Q91XZ6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb4Q91XZ6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb4Q91XZ6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb4Q91XZ6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb4Q91XZ6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb4Q91XZ6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Gm22567-201ENSMUST00000175542 342 ntBASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb4Q91XZ6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb4Q91XZ6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb4Q91XZ6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb4Q91XZ6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb4Q91XZ6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb4Q91XZ6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb4Q91XZ6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb4Q91XZ6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb4Q91XZ6 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.27■■□□□ 1
Pcdhb4Q91XZ6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pcdhb4Q91XZ6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb4Q91XZ6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.26■□□□□ 0.99
Pcdhb4Q91XZ6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb4Q91XZ6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb4Q91XZ6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb4Q91XZ6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb4Q91XZ6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb4Q91XZ6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb4Q91XZ6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb4Q91XZ6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms