Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna3Q8R4G9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna3Q8R4G9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna3Q8R4G9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna3Q8R4G9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chrna3Q8R4G9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna3Q8R4G9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Chrna3Q8R4G9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna3Q8R4G9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna3Q8R4G9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna3Q8R4G9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna3Q8R4G9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna3Q8R4G9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna3Q8R4G9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna3Q8R4G9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna3Q8R4G9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Chrna3Q8R4G9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Chrna3Q8R4G9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chrna3Q8R4G9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chrna3Q8R4G9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Chrna3Q8R4G9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.14■□□□□ 0.97
Chrna3Q8R4G9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.14■□□□□ 0.97
Chrna3Q8R4G9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna3Q8R4G9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Chrna3Q8R4G9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna3Q8R4G9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Chrna3Q8R4G9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.1■□□□□ 0.97
Chrna3Q8R4G9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna3Q8R4G9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.1■□□□□ 0.97
Chrna3Q8R4G9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna3Q8R4G9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Chrna3Q8R4G9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.08■□□□□ 0.97
Chrna3Q8R4G9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chrna3Q8R4G9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chrna3Q8R4G9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.07■□□□□ 0.96
Chrna3Q8R4G9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms