Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cdkl3Q8BLF2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkl3Q8BLF2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkl3Q8BLF2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkl3Q8BLF2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.58■□□□□ 0.57
Cdkl3Q8BLF2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkl3Q8BLF2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.58■□□□□ 0.57
Cdkl3Q8BLF2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkl3Q8BLF2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cdkl3Q8BLF2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkl3Q8BLF2 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.58■□□□□ 0.56
Cdkl3Q8BLF2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkl3Q8BLF2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkl3Q8BLF2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Gm30023-201ENSMUST00000197970 889 ntBASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cdkl3Q8BLF2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.56■□□□□ 0.56
Cdkl3Q8BLF2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkl3Q8BLF2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkl3Q8BLF2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Gm45855-201ENSMUST00000212546 880 ntBASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkl3Q8BLF2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cdkl3Q8BLF2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl3Q8BLF2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkl3Q8BLF2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkl3Q8BLF2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdkl3Q8BLF2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdkl3Q8BLF2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkl3Q8BLF2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkl3Q8BLF2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkl3Q8BLF2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Cdkl3Q8BLF2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkl3Q8BLF2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.49■□□□□ 0.55
Cdkl3Q8BLF2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdkl3Q8BLF2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkl3Q8BLF2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkl3Q8BLF2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkl3Q8BLF2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkl3Q8BLF2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl3Q8BLF2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl3Q8BLF2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl3Q8BLF2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkl3Q8BLF2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms