Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col12a1Q60847 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.05■■□□□ 1.12
Col12a1Q60847 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.05■■□□□ 1.12
Col12a1Q60847 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.05■■□□□ 1.12
Col12a1Q60847 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col12a1Q60847 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col12a1Q60847 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col12a1Q60847 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col12a1Q60847 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col12a1Q60847 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col12a1Q60847 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col12a1Q60847 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col12a1Q60847 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Col12a1Q60847 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.02■■□□□ 1.12
Col12a1Q60847 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Col12a1Q60847 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col12a1Q60847 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
Col12a1Q60847 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.02■■□□□ 1.11
Col12a1Q60847 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.02■■□□□ 1.11
Col12a1Q60847 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col12a1Q60847 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col12a1Q60847 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.01■■□□□ 1.11
Col12a1Q60847 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col12a1Q60847 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col12a1Q60847 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col12a1Q60847 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22■■□□□ 1.11
Col12a1Q60847 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22■■□□□ 1.11
Col12a1Q60847 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22■■□□□ 1.11
Col12a1Q60847 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.99■■□□□ 1.11
Col12a1Q60847 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col12a1Q60847 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col12a1Q60847 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col12a1Q60847 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Col12a1Q60847 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
Col12a1Q60847 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col12a1Q60847 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col12a1Q60847 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col12a1Q60847 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col12a1Q60847 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col12a1Q60847 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col12a1Q60847 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col12a1Q60847 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Col12a1Q60847 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col12a1Q60847 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Col12a1Q60847 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.97■■□□□ 1.11
Col12a1Q60847 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.97■■□□□ 1.11
Col12a1Q60847 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col12a1Q60847 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.96■■□□□ 1.11
Col12a1Q60847 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
Col12a1Q60847 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Col12a1Q60847 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col12a1Q60847 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.95■■□□□ 1.1
Col12a1Q60847 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col12a1Q60847 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col12a1Q60847 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col12a1Q60847 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col12a1Q60847 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.94■■□□□ 1.1
Col12a1Q60847 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Col12a1Q60847 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.93■■□□□ 1.1
Col12a1Q60847 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.93■■□□□ 1.1
Col12a1Q60847 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col12a1Q60847 Gm5874-201ENSMUST00000096101 508 ntBASIC21.92■■□□□ 1.1
Col12a1Q60847 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col12a1Q60847 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Col12a1Q60847 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col12a1Q60847 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col12a1Q60847 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col12a1Q60847 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.91■■□□□ 1.1
Col12a1Q60847 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col12a1Q60847 Gm10399-202ENSMUST00000202768 748 ntBASIC21.91■■□□□ 1.1
Col12a1Q60847 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col12a1Q60847 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col12a1Q60847 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col12a1Q60847 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.9■■□□□ 1.1
Col12a1Q60847 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col12a1Q60847 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Col12a1Q60847 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.89■■□□□ 1.09
Col12a1Q60847 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col12a1Q60847 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col12a1Q60847 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col12a1Q60847 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 1644.1 ms