Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip3Q60769 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip3Q60769 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip3Q60769 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip3Q60769 Gm15546-201ENSMUST00000122095 826 ntBASIC20.27■□□□□ 0.84
Tnfaip3Q60769 Gm22567-201ENSMUST00000175542 342 ntBASIC20.27■□□□□ 0.84
Tnfaip3Q60769 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Tnfaip3Q60769 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip3Q60769 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.25■□□□□ 0.83
Tnfaip3Q60769 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip3Q60769 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip3Q60769 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.25■□□□□ 0.83
Tnfaip3Q60769 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfaip3Q60769 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip3Q60769 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tnfaip3Q60769 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip3Q60769 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip3Q60769 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnfaip3Q60769 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tnfaip3Q60769 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip3Q60769 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip3Q60769 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfaip3Q60769 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Gm15820-201ENSMUST00000201566 728 ntBASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tnfaip3Q60769 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms