Protein–RNA interactions for Protein: P61961

Ufm1, Ubiquitin-fold modifier 1, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufm1P61961 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ufm1P61961 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
Ufm1P61961 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ufm1P61961 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ufm1P61961 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ufm1P61961 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ufm1P61961 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ufm1P61961 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ufm1P61961 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ufm1P61961 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.69■□□□□ 0.9
Ufm1P61961 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Ufm1P61961 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Ufm1P61961 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ufm1P61961 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Ufm1P61961 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ufm1P61961 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ufm1P61961 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ufm1P61961 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ufm1P61961 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.67■□□□□ 0.9
Ufm1P61961 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ufm1P61961 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.67■□□□□ 0.9
Ufm1P61961 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ufm1P61961 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ufm1P61961 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ufm1P61961 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ufm1P61961 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.66■□□□□ 0.9
Ufm1P61961 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ufm1P61961 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ufm1P61961 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ufm1P61961 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.64■□□□□ 0.9
Ufm1P61961 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.64■□□□□ 0.9
Ufm1P61961 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ufm1P61961 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ufm1P61961 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ufm1P61961 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ufm1P61961 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ufm1P61961 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ufm1P61961 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ufm1P61961 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ufm1P61961 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ufm1P61961 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ufm1P61961 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ufm1P61961 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.63■□□□□ 0.89
Ufm1P61961 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ufm1P61961 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.62■□□□□ 0.89
Ufm1P61961 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.62■□□□□ 0.89
Ufm1P61961 Gm44428-201ENSMUST00000204474 874 ntBASIC20.62■□□□□ 0.89
Ufm1P61961 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.62■□□□□ 0.89
Ufm1P61961 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.62■□□□□ 0.89
Ufm1P61961 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.61■□□□□ 0.89
Ufm1P61961 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ufm1P61961 Gm6311-201ENSMUST00000073790 878 ntBASIC20.61■□□□□ 0.89
Ufm1P61961 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ufm1P61961 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ufm1P61961 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ufm1P61961 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ufm1P61961 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ufm1P61961 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ufm1P61961 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ufm1P61961 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ufm1P61961 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufm1P61961 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ufm1P61961 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ufm1P61961 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ufm1P61961 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ufm1P61961 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ufm1P61961 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ufm1P61961 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ufm1P61961 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ufm1P61961 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ufm1P61961 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ufm1P61961 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ufm1P61961 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.58■□□□□ 0.88
Ufm1P61961 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ufm1P61961 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufm1P61961 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ufm1P61961 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ufm1P61961 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ufm1P61961 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ufm1P61961 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.57■□□□□ 0.88
Ufm1P61961 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
Ufm1P61961 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ufm1P61961 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms