Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rb1P13405 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rb1P13405 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.83■■□□□ 1.09
Rb1P13405 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.83■■□□□ 1.09
Rb1P13405 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rb1P13405 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rb1P13405 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rb1P13405 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rb1P13405 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rb1P13405 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rb1P13405 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rb1P13405 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rb1P13405 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rb1P13405 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rb1P13405 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rb1P13405 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Rb1P13405 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Rb1P13405 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rb1P13405 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rb1P13405 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rb1P13405 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rb1P13405 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rb1P13405 Gm10232-201ENSMUST00000089221 720 ntBASIC21.78■■□□□ 1.08
Rb1P13405 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rb1P13405 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rb1P13405 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rb1P13405 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rb1P13405 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.77■■□□□ 1.08
Rb1P13405 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rb1P13405 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Rb1P13405 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rb1P13405 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rb1P13405 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rb1P13405 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rb1P13405 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rb1P13405 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rb1P13405 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Rb1P13405 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rb1P13405 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rb1P13405 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rb1P13405 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.74■■□□□ 1.07
Rb1P13405 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rb1P13405 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rb1P13405 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rb1P13405 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rb1P13405 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.73■■□□□ 1.07
Rb1P13405 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rb1P13405 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rb1P13405 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rb1P13405 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.73■■□□□ 1.07
Rb1P13405 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rb1P13405 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.72■■□□□ 1.07
Rb1P13405 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.72■■□□□ 1.07
Rb1P13405 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rb1P13405 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rb1P13405 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Etf1-202ENSMUST00000180351 108 ntBASIC21.71■■□□□ 1.07
Rb1P13405 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.71■■□□□ 1.07
Rb1P13405 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rb1P13405 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.71■■□□□ 1.07
Rb1P13405 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rb1P13405 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rb1P13405 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.7■■□□□ 1.06
Rb1P13405 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rb1P13405 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Rb1P13405 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Rb1P13405 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rb1P13405 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms