Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctla2aP12399 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.46■□□□□ 0.71
Ctla2aP12399 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctla2aP12399 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctla2aP12399 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctla2aP12399 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ctla2aP12399 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctla2aP12399 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ctla2aP12399 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctla2aP12399 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ctla2aP12399 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctla2aP12399 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctla2aP12399 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ctla2aP12399 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctla2aP12399 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctla2aP12399 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctla2aP12399 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctla2aP12399 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctla2aP12399 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Ctla2aP12399 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctla2aP12399 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctla2aP12399 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ctla2aP12399 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctla2aP12399 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctla2aP12399 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctla2aP12399 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctla2aP12399 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.39■□□□□ 0.7
Ctla2aP12399 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Gm22567-201ENSMUST00000175542 342 ntBASIC19.39■□□□□ 0.69
Ctla2aP12399 Gm45855-201ENSMUST00000212546 880 ntBASIC19.39■□□□□ 0.69
Ctla2aP12399 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctla2aP12399 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctla2aP12399 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctla2aP12399 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctla2aP12399 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctla2aP12399 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctla2aP12399 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Ctla2aP12399 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctla2aP12399 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.36■□□□□ 0.69
Ctla2aP12399 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctla2aP12399 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
Ctla2aP12399 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctla2aP12399 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctla2aP12399 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ctla2aP12399 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctla2aP12399 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Ctla2aP12399 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctla2aP12399 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctla2aP12399 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctla2aP12399 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Ctla2aP12399 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctla2aP12399 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctla2aP12399 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctla2aP12399 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctla2aP12399 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctla2aP12399 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctla2aP12399 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctla2aP12399 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctla2aP12399 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctla2aP12399 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctla2aP12399 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctla2aP12399 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ctla2aP12399 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.32■□□□□ 0.68
Ctla2aP12399 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctla2aP12399 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctla2aP12399 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctla2aP12399 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctla2aP12399 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ctla2aP12399 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms