Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1hO88427 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Cacna1hO88427 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.74■■□□□ 1.07
Cacna1hO88427 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1hO88427 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.73■■□□□ 1.07
Cacna1hO88427 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1hO88427 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1hO88427 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
Cacna1hO88427 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cacna1hO88427 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cacna1hO88427 Gm10849-201ENSMUST00000100397 618 ntBASIC21.72■■□□□ 1.07
Cacna1hO88427 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1hO88427 Gm26571-201ENSMUST00000181399 666 ntBASIC21.71■■□□□ 1.07
Cacna1hO88427 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1hO88427 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1hO88427 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Cacna1hO88427 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Cacna1hO88427 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.7■■□□□ 1.06
Cacna1hO88427 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cacna1hO88427 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1hO88427 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1hO88427 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1hO88427 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1hO88427 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1hO88427 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1hO88427 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cacna1hO88427 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1hO88427 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1hO88427 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1hO88427 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cacna1hO88427 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.67■■□□□ 1.06
Cacna1hO88427 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cacna1hO88427 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.67■■□□□ 1.06
Cacna1hO88427 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.66■■□□□ 1.06
Cacna1hO88427 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1hO88427 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.65■■□□□ 1.06
Cacna1hO88427 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1hO88427 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cacna1hO88427 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cacna1hO88427 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1hO88427 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1hO88427 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1hO88427 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1hO88427 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cacna1hO88427 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cacna1hO88427 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.63■■□□□ 1.05
Cacna1hO88427 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.63■■□□□ 1.05
Cacna1hO88427 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1hO88427 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1hO88427 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1hO88427 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.62■■□□□ 1.05
Cacna1hO88427 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1hO88427 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1hO88427 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.61■■□□□ 1.05
Cacna1hO88427 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1hO88427 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1hO88427 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1hO88427 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cacna1hO88427 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Cacna1hO88427 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1hO88427 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1hO88427 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.6■■□□□ 1.05
Cacna1hO88427 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
Cacna1hO88427 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Cacna1hO88427 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1hO88427 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1hO88427 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1hO88427 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1hO88427 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.59■■□□□ 1.05
Cacna1hO88427 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cacna1hO88427 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.59■■□□□ 1.05
Cacna1hO88427 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1hO88427 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1hO88427 Spcs1-204ENSMUST00000226782 949 ntBASIC21.58■■□□□ 1.05
Cacna1hO88427 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1hO88427 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1hO88427 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1hO88427 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1hO88427 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Cacna1hO88427 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1hO88427 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Cacna1hO88427 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1hO88427 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cacna1hO88427 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1hO88427 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.56■■□□□ 1.04
Cacna1hO88427 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cacna1hO88427 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1hO88427 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.56■■□□□ 1.04
Cacna1hO88427 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1hO88427 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1hO88427 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.56■■□□□ 1.04
Cacna1hO88427 Mir7075-201ENSMUST00000184187 82 ntBASIC21.56■■□□□ 1.04
Cacna1hO88427 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Cacna1hO88427 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1hO88427 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms