Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GMDSO60547 AL359504.2-201ENST00000605506 1601 ntBASIC20.94■□□□□ 0.94
GMDSO60547 AC022413.1-201ENST00000624602 984 ntBASIC20.94■□□□□ 0.94
GMDSO60547 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GMDSO60547 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GMDSO60547 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
GMDSO60547 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
GMDSO60547 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GMDSO60547 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GMDSO60547 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.93■□□□□ 0.94
GMDSO60547 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.93■□□□□ 0.94
GMDSO60547 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GMDSO60547 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
GMDSO60547 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GMDSO60547 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.93■□□□□ 0.94
GMDSO60547 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
GMDSO60547 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
GMDSO60547 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
GMDSO60547 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.92■□□□□ 0.94
GMDSO60547 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.92■□□□□ 0.94
GMDSO60547 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMDSO60547 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 AC142381.3-201ENST00000568208 1670 ntBASIC20.91■□□□□ 0.94
GMDSO60547 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GMDSO60547 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GMDSO60547 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GMDSO60547 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMDSO60547 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GMDSO60547 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMDSO60547 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMDSO60547 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMDSO60547 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.9■□□□□ 0.94
GMDSO60547 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMDSO60547 AC010501.1-201ENST00000606270 1962 ntBASIC20.9■□□□□ 0.94
GMDSO60547 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GMDSO60547 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GMDSO60547 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GMDSO60547 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
GMDSO60547 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
GMDSO60547 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMDSO60547 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMDSO60547 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMDSO60547 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 AL139125.2-201ENST00000623134 1869 ntBASIC20.88■□□□□ 0.93
GMDSO60547 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GMDSO60547 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GMDSO60547 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.88■□□□□ 0.93
GMDSO60547 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 AC092296.2-201ENST00000589470 999 ntBASIC20.88■□□□□ 0.93
GMDSO60547 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMDSO60547 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.88■□□□□ 0.93
GMDSO60547 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
GMDSO60547 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
GMDSO60547 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.87■□□□□ 0.93
GMDSO60547 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.87■□□□□ 0.93
GMDSO60547 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.87■□□□□ 0.93
GMDSO60547 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GMDSO60547 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GMDSO60547 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMDSO60547 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMDSO60547 GPX1-201ENST00000419349 1106 ntBASIC20.86■□□□□ 0.93
GMDSO60547 ECEL1P2-201ENST00000461596 1295 ntBASIC20.86■□□□□ 0.93
GMDSO60547 AL157400.5-201ENST00000507624 621 ntBASIC20.86■□□□□ 0.93
GMDSO60547 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
GMDSO60547 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.86■□□□□ 0.93
GMDSO60547 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMDSO60547 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GMDSO60547 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMDSO60547 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GMDSO60547 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GMDSO60547 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GMDSO60547 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GMDSO60547 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GMDSO60547 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.84■□□□□ 0.93
GMDSO60547 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms