Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Abca4O35600 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abca4O35600 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.03■□□□□ 0.96
Abca4O35600 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Abca4O35600 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abca4O35600 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abca4O35600 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abca4O35600 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Abca4O35600 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
Abca4O35600 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abca4O35600 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abca4O35600 Spcs1-204ENSMUST00000226782 949 ntBASIC21■□□□□ 0.95
Abca4O35600 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abca4O35600 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21■□□□□ 0.95
Abca4O35600 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abca4O35600 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Abca4O35600 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca4O35600 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca4O35600 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca4O35600 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.99■□□□□ 0.95
Abca4O35600 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca4O35600 Gm10849-201ENSMUST00000100397 618 ntBASIC20.99■□□□□ 0.95
Abca4O35600 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca4O35600 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.99■□□□□ 0.95
Abca4O35600 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abca4O35600 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abca4O35600 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abca4O35600 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abca4O35600 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Abca4O35600 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.97■□□□□ 0.95
Abca4O35600 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Abca4O35600 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abca4O35600 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Abca4O35600 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Abca4O35600 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abca4O35600 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.95■□□□□ 0.94
Abca4O35600 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.95■□□□□ 0.94
Abca4O35600 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abca4O35600 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abca4O35600 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abca4O35600 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abca4O35600 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Abca4O35600 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Abca4O35600 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.94■□□□□ 0.94
Abca4O35600 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Abca4O35600 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abca4O35600 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abca4O35600 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Abca4O35600 Gm37179-201ENSMUST00000194862 823 ntBASIC20.93■□□□□ 0.94
Abca4O35600 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abca4O35600 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Abca4O35600 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abca4O35600 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abca4O35600 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abca4O35600 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abca4O35600 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abca4O35600 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Abca4O35600 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Abca4O35600 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Abca4O35600 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Abca4O35600 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.91■□□□□ 0.94
Abca4O35600 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Abca4O35600 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.9■□□□□ 0.94
Abca4O35600 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abca4O35600 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abca4O35600 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.9■□□□□ 0.94
Abca4O35600 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.9■□□□□ 0.94
Abca4O35600 Mir7075-201ENSMUST00000184187 82 ntBASIC20.9■□□□□ 0.94
Abca4O35600 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Abca4O35600 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.9■□□□□ 0.94
Abca4O35600 Gm43137-201ENSMUST00000198052 594 ntBASIC20.89■□□□□ 0.94
Abca4O35600 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Abca4O35600 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca4O35600 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Abca4O35600 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Abca4O35600 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Abca4O35600 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.87■□□□□ 0.93
Abca4O35600 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca4O35600 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.86■□□□□ 0.93
Abca4O35600 Gm43017-201ENSMUST00000198296 752 ntBASIC20.86■□□□□ 0.93
Abca4O35600 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.86■□□□□ 0.93
Abca4O35600 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abca4O35600 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms