Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Polr2jO08740 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Polr2jO08740 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.7■□□□□ 0.9
Polr2jO08740 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr2jO08740 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Polr2jO08740 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2jO08740 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2jO08740 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2jO08740 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2jO08740 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2jO08740 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2jO08740 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2jO08740 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2jO08740 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2jO08740 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2jO08740 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2jO08740 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Polr2jO08740 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Polr2jO08740 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Polr2jO08740 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2jO08740 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2jO08740 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2jO08740 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2jO08740 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
Polr2jO08740 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2jO08740 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
Polr2jO08740 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Polr2jO08740 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.65■□□□□ 0.9
Polr2jO08740 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2jO08740 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2jO08740 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.64■□□□□ 0.9
Polr2jO08740 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2jO08740 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2jO08740 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2jO08740 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Polr2jO08740 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2jO08740 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.63■□□□□ 0.89
Polr2jO08740 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Polr2jO08740 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2jO08740 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Polr2jO08740 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2jO08740 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Polr2jO08740 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2jO08740 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Polr2jO08740 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Polr2jO08740 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.62■□□□□ 0.89
Polr2jO08740 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2jO08740 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.62■□□□□ 0.89
Polr2jO08740 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Polr2jO08740 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Polr2jO08740 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2jO08740 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.61■□□□□ 0.89
Polr2jO08740 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2jO08740 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Polr2jO08740 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2jO08740 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr2jO08740 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.59■□□□□ 0.89
Polr2jO08740 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2jO08740 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Polr2jO08740 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2jO08740 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Polr2jO08740 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Polr2jO08740 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.59■□□□□ 0.89
Polr2jO08740 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr2jO08740 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Polr2jO08740 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2jO08740 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Polr2jO08740 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.58■□□□□ 0.89
Polr2jO08740 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr2jO08740 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr2jO08740 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.57■□□□□ 0.88
Polr2jO08740 Gm44428-201ENSMUST00000204474 874 ntBASIC20.57■□□□□ 0.88
Polr2jO08740 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr2jO08740 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Polr2jO08740 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2jO08740 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2jO08740 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr2jO08740 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.55■□□□□ 0.88
Polr2jO08740 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2jO08740 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2jO08740 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr2jO08740 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Polr2jO08740 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms