Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12-1A0N8R1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav12-1A0N8R1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-1A0N8R1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-1A0N8R1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12-1A0N8R1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav12-1A0N8R1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav12-1A0N8R1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12-1A0N8R1 Gm44428-201ENSMUST00000204474 874 ntBASIC18.02■□□□□ 0.48
Trav12-1A0N8R1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav12-1A0N8R1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12-1A0N8R1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12-1A0N8R1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trav12-1A0N8R1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12-1A0N8R1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12-1A0N8R1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12-1A0N8R1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trav12-1A0N8R1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12-1A0N8R1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12-1A0N8R1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18■□□□□ 0.47
Trav12-1A0N8R1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12-1A0N8R1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12-1A0N8R1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav12-1A0N8R1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav12-1A0N8R1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12-1A0N8R1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav12-1A0N8R1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav12-1A0N8R1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12-1A0N8R1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav12-1A0N8R1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms