Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-1A0A0G2JEV5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav7-1A0A0G2JEV5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-1A0A0G2JEV5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav7-1A0A0G2JEV5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav7-1A0A0G2JEV5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-1A0A0G2JEV5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-1A0A0G2JEV5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-1A0A0G2JEV5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-1A0A0G2JEV5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Trav7-1A0A0G2JEV5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-1A0A0G2JEV5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-1A0A0G2JEV5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-1A0A0G2JEV5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-1A0A0G2JEV5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav7-1A0A0G2JEV5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-1A0A0G2JEV5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-1A0A0G2JEV5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav7-1A0A0G2JEV5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav7-1A0A0G2JEV5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-1A0A0G2JEV5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms