Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv1-20A0A0A6YX66 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-20A0A0A6YX66 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-20A0A0A6YX66 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Gm22567-201ENSMUST00000175542 342 ntBASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-20A0A0A6YX66 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-20A0A0A6YX66 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-20A0A0A6YX66 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.43■□□□□ 0.38
Ighv1-20A0A0A6YX66 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-20A0A0A6YX66 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-20A0A0A6YX66 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Gm10232-201ENSMUST00000089221 720 ntBASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-20A0A0A6YX66 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-20A0A0A6YX66 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-20A0A0A6YX66 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ighv1-20A0A0A6YX66 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.4■□□□□ 0.38
Ighv1-20A0A0A6YX66 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Ighv1-20A0A0A6YX66 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-20A0A0A6YX66 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-20A0A0A6YX66 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-20A0A0A6YX66 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.36■□□□□ 0.37
Ighv1-20A0A0A6YX66 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms