Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.03■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-23A0A0A6YVW3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.02■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-23A0A0A6YVW3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-23A0A0A6YVW3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.02■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Terc-201ENSMUST00000082862 423 ntBASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Mir3960-201ENSMUST00000198213 73 ntBASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.96■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ighv1-23A0A0A6YVW3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ighv1-23A0A0A6YVW3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms