Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm30023-201ENSMUST00000197970 889 ntBASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav8-1A0A075B641 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav8-1A0A075B641 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav8-1A0A075B641 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav8-1A0A075B641 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8-1A0A075B641 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8-1A0A075B641 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav8-1A0A075B641 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8-1A0A075B641 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Zfp131-205ENSMUST00000223812 663 ntBASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8-1A0A075B641 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8-1A0A075B641 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav8-1A0A075B641 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8-1A0A075B641 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 178.5 ms